edu.uconn.mcb.lineageevolver
Class AATranslator.InvalidAminoAcid.InvalidAminoAcidInt

java.lang.Object
  java.lang.Throwable
      java.lang.Exception
          java.lang.RuntimeException
              edu.uconn.mcb.lineageevolver.AATranslator.InvalidAminoAcid
                  edu.uconn.mcb.lineageevolver.AATranslator.InvalidAminoAcid.InvalidAminoAcidInt

All Implemented Interfaces:

java.io.Serializable

Enclosing class:

AATranslator.InvalidAminoAcid

public static class AATranslator.InvalidAminoAcid.InvalidAminoAcidInt

extends AATranslator.InvalidAminoAcid

Exception thrown when an integer value outside the AminoAcid range (0-19) was used as an encoded AminoAcid.

See Also:

Serialized Form

Nested Class Summary

Nested classes inherited from class edu.uconn.mcb.lineageevolver.AATranslator.InvalidAminoAcid

AATranslator.InvalidAminoAcid.InvalidAminoAcidByte, AATranslator.InvalidAminoAcid.InvalidAminoAcidChar, AATranslator.InvalidAminoAcid.InvalidAminoAcidInt

Field Summary

int	aa The bad integer that was used as an encoded AminoAcid.

Fields inherited from class java.lang.RuntimeException

Fields inherited from class java.lang.Throwable

Constructor Summary

(package private)

AATranslator.InvalidAminoAcid.InvalidAminoAcidInt(int aa) Constructor for InvalidAminoAcidInt objects given a non-AminoAcid-coding integer.

Methods inherited from class java.lang.Throwable

fillInStackTrace, getCause, getLocalizedMessage, getMessage, getStackTrace, initCause, printStackTrace, printStackTrace, printStackTrace, setStackTrace, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

aa

public final int aa

The bad integer that was used as an encoded AminoAcid.

Constructor Detail

AATranslator.InvalidAminoAcid.InvalidAminoAcidInt

AATranslator.InvalidAminoAcid.InvalidAminoAcidInt(int aa)

Constructor for InvalidAminoAcidInt objects given a non-AminoAcid-coding integer.

Parameters:

aa - the bad integer that was used as an encoded AminoAcid.