edu.uconn.mcb.lineageevolver
Class GeneKiller

java.lang.Object
  edu.uconn.mcb.lineageevolver.GenomeVisitor
      edu.uconn.mcb.lineageevolver.GeneKiller

All Implemented Interfaces:

Visitor

public class GeneKiller

extends GenomeVisitor

GenomeVisitor subclass encapsulating gene death functionality.

Author:

Lina Pezzella, Hasan Khalil

Constructor Summary

GeneKiller()

Method Summary

void	applyToGenome(Genome g) Processes gene death on the provided genome.

Methods inherited from class edu.uconn.mcb.lineageevolver.GenomeVisitor

applyTo

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GeneKiller

public GeneKiller()

Method Detail

applyToGenome

public void applyToGenome(Genome g)

Processes gene death on the provided genome. Selects a genome randomly, weighted using gene evolution speeds, then delegates to Genome.killGene() for the actual murder.

Specified by:

applyToGenome in class GenomeVisitor

Parameters:

g - the genome from which a gene should die.

See Also:

Visitor.applyTo(edu.uconn.mcb.lineageevolver.misc.Visitable), Genome.getGeneEvolutionSpeeds(), Genome.killGene(int)