Uses of Interface
edu.uconn.mcb.lineageevolver.Substitutable

Packages that use Substitutable

edu.uconn.mcb.lineageevolver

Provides all basic, universal LineageEvolver classes directly, and serves as a parent for all other LineageEvolver packages.

Uses of Substitutable in edu.uconn.mcb.lineageevolver

Subinterfaces of Substitutable in edu.uconn.mcb.lineageevolver

interface

AminoAcid Common interface for models of amino acids.

Classes in edu.uconn.mcb.lineageevolver that implement Substitutable

class

ByteAminoAcid Amino Acid implementation using byte datatype.

Methods in edu.uconn.mcb.lineageevolver that return Substitutable

Substitutable	SubstitutionMatrix.getSubstitution(Substitutable s) Returns a suitable substitution for the provided substitutable according to this substitution matrix.
Substitutable	JTT.getSubstitution(Substitutable s)

Methods in edu.uconn.mcb.lineageevolver with parameters of type Substitutable

Substitutable	SubstitutionMatrix.getSubstitution(Substitutable s) Returns a suitable substitution for the provided substitutable according to this substitution matrix.
Substitutable	JTT.getSubstitution(Substitutable s)